Overview

Welcome to the CPRIT single cell genomic center (SCGC) at the MD Anderson Cancer Center. This CPRIT funded facility supports collaborative projects and core services for single cell sequencing technologies. The center is directed by Dr. Nicholas Navin (www.navinlab.com) and consists of four main components:

  • Tissue dissociation facility
  • Technologies & assays
  • Next-generation sequencing
  • Data processing & analysis

The SCG has two tracks available for users: (1) core services and (2) collaborative projects. The core services is intended for short-term projects that involve submitting samples, running assays and returning datasets. The collaborative track involves long-term projects with members of the user group. Please contact the core director if you want more information on joining the user group. Another focus of SCGC is training and education activities, including the Texas Single Cell (TXSC) weekly seminar series and Single Cell Genomics summer workshop. The SCGC also focuses on research activities, including the development of new technologies for single cell genomics.

To request services at SCGC please use ilab

Services Available

  • Tissue dissociation
  • Direct Tagmentation CNA Profiling
  • 10X Genomics 3’RNA
  • 10X Genomics 5’RNA
  • 10X Chromium Single Cell ATAC Solution
  • 10X Chromium Single Cell CNV Solution
  • MissionBio Targeted Mutation Sequencing
  • Data Pre-Processing Pipelines
  • Data Analysis & Bioinformatics Support
Service Track Collaboration Track
Single Experiments Longer Term Projects With Many Samples
No Authorship Expectations Joint Authorship on Publications
Any Users Focus on User Group
Not Discounted User Group Discount on Services

Acknowledgement of CPRIT Funding

Please remember to acknowledge the “CPRIT Single Cell Genomics Core Facilities Grant (RP180684)” in your manuscripts that include data generated by our facility

Location

DEPARTMENT OF GENETICS

THE UNIVERSITY OF TEXAS MD ANDERSON CANCER CENTER

6767 BERTNER AVE. ROOM BSRB S15.8412

HOUSTON, TX, 77030